5 Best Invoicing Software for Small Businesses in 2025 

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India is home to over 6.44 crore micro, small, and medium enterprises, but only a few of them maintain invoicing software to track sales, manage inventory, GST compliance, and more. Running a small and growing business can be a challenging endeavour.  

The common questions that usually come to mind while choosing the right billing software are; 

  • Which one to choose out of multiple options available? 
  • Which features to look out for in the right invoicing and accounting software? 
  • What benefits should a right billing software provide? 

You have to wear multiple hats to manage business, and it makes it all the more important to consider a billing software as a lieutenant that guides you in transforming from traditional inventory and accounting management to modern automated cloud-based invoicing. 

However, it might be overwhelming to choose one billing software out of dozens of options available. To save you time, we have researched the web and compiled the five best invoicing software in India for 2025 and beyond.  

We will explore the top features and benefits of this software for your quick reference and make an informed decision for the sake of your business. 

What are the Top Five Invoicing Software in India 2025 and Beyond? 

We are sharing here the top five invoicing and accounting software based on customer feedback on social channels and web, expert assessments, users’ experience, and years of existence. 

  1. Marg ERP: Best Billing Software in India 

Marg ERP has been serving small and growing businesses for over 32 years. It is one of the most popular and trusted billing software in India, used by over 10 lakh small and medium businesses. 

Over 50% pharma and FMCG billing happens on Marg ERP and has a strong presence in pharma, retail, and distribution. Marg combines easy invoicing with advanced features and integrations that help businesses grow. 

Features of Marg Invoicing Software 

  • GST-compliant billing with automatic tax calculation 
  • Customisable invoice formats for every business type 
  • ERP-to-ERP ordering for chemists and distributors. 
  • Real-time stock and inventory management 
  • e-Invoicing and e-Way Bill generation in one click 
  • Multi-device and multi-location access (desktop and mobile app support) 
  • Seamless integration with accounting and GST returns 
  • Integrated banking and auto-bank reconciliation 
  • Regular updates to stay compliant with government rules 

Benefits of Marg ERP 

  • Saves time by automating routine tasks 
  • Reduces errors in GST billing and returns 
  • GST 2.0 compliant and single slot update in a few clicks 
  • Supports industry-specific needs, especially pharma and retail 
  • Improves business efficiency with live stock visibility 
  • Affordable pricing plans for small businesses 
  • Connected banking with SBI, Axis Bank, J&K Bank, and ICICI Bank 
  • MargPay, Marg Mart, PharmaNXT, and a suite of mobile apps 
  • 24×7 customer support across India 

Marg ERP is the best billing software in India and has been the first choice for lakhs of small businesses over the years. Call them or visit their website for 7 days free trial or book a demo for all-in-one inventory and accounting software. 

  1. TallyPrime 

Started in 1986 as an MS-DOS-based accounting software, Tally has evolved into a household name in the accounting and billing process for businesses. TallyPrime offers the following features and GST support for small and growing businesses. 

Key Features of TallyPrime 

  • GST-ready invoicing 
  • Multi-currency billing for export businesses 
  • Inventory and accounting in one platform 
  • Remote access with Tally on Cloud 

Benefits as an Invoicing Software 

  • Easy to use for accountants and small business owners 
  • Strong after-sales service 
  • Reliable and secure with long market presence 

3) Zoho Invoice 

Zoho Invoice is a popular choice for new-age invoicing software among freelancers, startups, and service-based organisations. It is cloud-based and offers a free plan with limited features. 

Key Features 

  • Professional invoice templates 
  • Automated reminders for payments 
  • Expense tracking 
  • Client portal for online payments 

Benefits for Small Businesses 

  • Free plan available (with some limitations) 
  • Great for digital-first and service-oriented businesses 
  • Supports integration with the Zoho ecosystem and third-party apps 

4) MyBillBook 

MyBillBook is a widely used billing software across India. Curated for small businesses, it offers strong invoicing and accounting features. For the MSME sector, it is known for its simple interface and cloud features. 

Features of MyBillBook 

  • Cloud-based invoicing 
  • Expense and bank reconciliation 
  • GST-compliant billing 
  • Dashboard for financial insights 

Benefits as an Invoicing Software for Small Businesses 

  • Simple for non-accounting users 
  • Scalable for growing businesses 
  • International brand with a strong reputation 

5) Vyapar App 

Vyapar is a mobile-first GST billing software designed for Indian small businesses. According to their website, the app has been used by over 1 crore businesses, especially petty shopkeepers and local traders. 

Core Features 

  • GST-compliant invoices 
  • Works offline without internet 
  • Stock and inventory management 
  • Reports for tax filing and business insights 

Benefits for Small Businesses 

  • Easy to install and use on mobile 
  • Affordable for small traders 
  • Helps track expenses and receivables. 

Things to Consider When Choosing the Best Invoicing Software in India 

Before you decide on any billing software or invoicing software, keep the following points in mind: 

  1. GST Compliance: The software should be updated with the latest GST rules. 
  1. Ease of Use: Look for a simple design and easy navigation. 
  1. Customisation: Ability to design invoices as per your business needs. 
  1. Integration: Check if it can connect with inventory, accounting, and e-way bill systems. 
  1. Support: 24×7 customer support is important, especially for small businesses. 
  1. Pricing: Choose a solution that is affordable but doesn’t compromise on features. 

Conclusion 

Small businesses in India cannot ignore the importance of good invoicing software or billing software in 2025. It saves time, ensures GST compliance, and improves customer trust. 

Among all options, Marg ERP stands out as the best billing software in India because of its industry-specific features, wide adoption, and affordable pricing. Whether you are a chemist, distributor, retailer, or service provider, Marg ERP helps you simplify billing and grow your business. 

Frequently Asked Questions 

What is invoicing software? 

Invoicing software helps create, send, and manage bills for customers. It automates GST, payments, and reports. 

Which is the best billing software in India for small businesses? 

Marg ERP is considered the best billing software in India for small businesses in 2025. 

Can invoicing software work offline? 

Yes, some invoicing software, like Marg ERP and Vyapar, offer limited offline functionality. 

Do I need GST billing software if my business is not GST-registered? 

You can still use invoicing software without GST. But if you cross GST limits, GST billing software becomes essential. 

Is Invoicing Software Expensive? 

Not at all. Many billing software options, including Marg ERP, offer affordable plans for small businesses. 

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