Running a small or growing business in India today is not easy. Business owners spend hours juggling GST compliance, inventory control, customer invoicing, and accounting. While these tasks are essential, they also take away precious time that could otherwise be used to focus on growth.
In today’s digital age—powered by AI, cloud computing, and mobile apps—manual processes are no longer sustainable. Errors in invoicing, missed payment reminders, or delays in filing GST returns can directly impact cash flow and customer relationships. This is where billing software plays a crucial role.
The right billing solution does much more than generate invoices. It automates repetitive tasks, reduces errors, ensures GST compliance, improves cash flow, and provides insights into business performance. With so many options available in the market, choosing the right tool can be overwhelming for entrepreneurs.
To make your decision easier, we reviewed dozens of tools based on features, pricing, integrations, scalability, and user feedback.
Here’s our list of the Top 6 Billing Software in India for 2025 that are best suited for small and growing businesses.
- Marg ERP: India’s Growth Partner for SMEs
Marg ERP is one of India’s most trusted billing and inventory solutions, serving businesses for over 32 years. Built specifically for MSMEs, it offers much more than billing—it combines GST compliance, inventory tracking, e-commerce integration, ERP-to-ERP ordering, and even a unique PharmaNXT drug helpline.
It is widely used in sectors like pharma, FMCG and other. What sets Marg apart is its adaptability; businesses can choose from industry-specific modules and scale as they grow.
Core Features
- GST-Ready Billing & E-Filing: Generate GST-compliant invoices, e-way bills, and file returns such as GSTR-9 directly.
- ERP-to-ERP Ordering: Place orders between distributors and retailers automatically, ensuring real-time updates of stock, rates, and schemes.
- MargMart: Launch your online store in just 15 minutes, with built-in order and inventory integration.
- PharmaNXT Helpline: Specially designed for chemists and distributors, with access to over 3 lakh medicines (soon to reach 5+ lakh).
- Mobile App Suite: Includes eOwner, eOrder, eRetail, eDelivery, and SFA Xpert apps for on-the-go business management.
- WhatsApp Invoicing & Marg Pay: Send invoices via WhatsApp and receive payments instantly with zero charges and 2% cashback.
Best For: SMEs in pharma, FMCG, retail, and manufacturing looking for a complete ERP with billing, inventory, and compliance.
- Vyapar: Simple and Growth-Oriented
Launched in 2016, Vyapar quickly became a favourite for small and micro businesses due to its simplicity and affordability. Its mobile and desktop versions make it ideal for shop owners, freelancers, and traders who want billing software without the learning curve.
Vyapar Billing Software’s focus is to make invoicing and accounting accessible for businesses that do not have large teams or advanced technical knowledge.
Key Features:
- Create and share GST-compliant invoices.
- Track inventory in real time and get low-stock alerts.
- Automate payment reminders to reduce delays.
- Generate 37+ reports including profit & loss and sales summaries.
- Works offline and syncs data once online.
Best For: Small shops, traders, and micro businesses looking for easy-to-use billing software.
- Zoho Invoice: 100% Free Online Invoicing Software
Zoho Invoice is part of the globally recognised Zoho suite. What makes it stand out is its forever-free plan, which allows invoicing for up to 50 customers. This makes it ideal for freelancers, consultants, and small businesses with limited budgets.
While it is free, Zoho Invoice does not compromise on features. It offers professional invoicing, automation, and integrations with payment gateways.
Key Features:
- Create and send customized invoices at no cost.
- Track time spent on projects and bill clients accurately.
- Integrate with payment gateways for faster payments.
- Provide clients with a portal to track their invoices and payments.
- Multi-currency support for businesses working with international clients.
Best For: Freelancers, consultants, and startups looking for a professional invoicing tool without costs.
- TallyPrime: The Industry Standard ERP
When it comes to accounting in India, Tally has been the trusted name since 1986. Its latest version, TallyPrime, combines powerful accounting with robust billing features. It is perfect for businesses that require comprehensive financial management in addition to invoicing.
Tally is scalable, supports complex business structures, and is used by millions across industries.
Key Features:
- Complete accounting features like ledgers, trial balance, and P&L statements.
- Advanced GST compliance, including e-invoicing and e-way bill generation.
- Multi-location inventory management with batch tracking.
- Remote access for owners and accountants.
- Handles large data volumes, making it suitable for growing enterprises.
Best For: Businesses that need in-depth accounting along with billing and compliance.
- MyBillBook: Mobile-First for SMEs
MyBillBook is designed for business owners who prefer managing everything from their smartphone. It is especially popular among small traders, retailers, and wholesalers. With its mobile-first design, users can handle invoicing, payments, and inventory without being tied to a desktop.
Key Features:
- Mobile app for instant billing and account management.
- GST and non-GST invoicing support.
- Create a free online store to showcase products.
- WhatsApp integration for invoices and payment reminders.
- Data automatically syncs between mobile and desktop.
Best For: Small businesses and startups that operate primarily through smartphones.
- Busy Accounting Software: Reliable and Scalable
BUSY Accounting Software has been serving MSMEs for decades and is known for its reliability. It combines billing, accounting, and inventory management in a single platform. Businesses from different industries use BUSY because it scales easily and adapts to complex requirements.
Key Features:
- GST and VAT compliance built in.
- Multi-location inventory with batch and expiry tracking.
- Advanced scheme and discount management.
- Wide range of MIS reports for decision-making.
- Flexible invoice customization.
Best For: MSMEs that want a proven, reliable, and feature-rich billing and accounting software.
Comparison Table of Top 6 Billing Software in India 2025
| Billing Software | Best For | Key Highlights |
| Marg ERP | SMEs in pharma, FMCG, retail | ERP-to-ERP Ordering & PharmaNXT Helpline |
| Vyapar | Small shops & traders | Offline + Online Billing |
| Zoho Invoice | Freelancers & startups | 100% Free Forever |
| TallyPrime | Growing enterprises | Advanced GST & Accounting |
| MyBillBook | Mobile-first users | WhatsApp Billing & Online Store |
| BUSY | MSMEs of all sizes | Advanced Accounting & Inventory |
Conclusion
Billing software is no longer optional—it is a necessity for small businesses aiming to survive and grow in India’s competitive market. The right tool can save hours of manual effort, reduce errors, ensure compliance, and help business owners focus on scaling.
- If you want an all-in-one ERP and billing solution, go for Marg ERP.
- If you prefer simple and affordable, choose Vyapar.
- For a free professional invoicing tool, try Zoho Invoice.
- If you need full-fledged accounting plus billing, TallyPrime is the standard.
- For a mobile-first experience, MyBillBook is the best pick.
- And if you need a scalable, reliable accounting suite, BUSY is a safe choice.
Whatever your business size or industry, one of these six tools can simplify billing and accounting, giving you more time to focus on growth in 2025 and beyond.
